Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015793686.1_cds_XP_016435107.1_3022
CDS Infomation

[gene=LOC107761389] [db_xref=GeneID:107761389] [protein=phosphatidylserine decarboxylase proenzyme 2-like isoform X2] [protein_id=XP_016435107.1] [location=join(43198..43245,43318..43397,44401..44425,45412..45471,46091..46159,47138..47227,47321..47371,47914..47997,48272..48363,49963..50118,50262..50346,50929..51040,52802..52902,54283..54330,54779..54925,55295..55405)] [gbkey=CDS]
Sequence

ATGCAGAATGTAGCTCGCAAGGTTTCCAAACTTTTTGTACACAATCTGGCAGAGATGAAA
TTCAAGGACAAATGGCTAGTCTGTATTTCTCTTGGTGAACAAACTTTTCGCACCCATGTG
TCTGATCAAACTGACAAGCCGACCTGGAACTCAGAAAAAAAGCTTCTTTTGGAAAGACAT
GGAGCCCATATTGCAAGAATATCTGTTTTTGAGACCAACAGGCTTTCCAAGAACAATCTG
ATTGGTTACTGTGAGATAGATCTACTTGAATTTCTTTCTCAGGATTCCAGTTCTGATACT
GAGGTTTTTGACTTGTTAGACCCATCATCCTTATCAACTGTTGGCCGTATATCTATTTCA
TGTTGCATCGAGGACCCTGTTGACACAGAGAAAAGCTTTGTTCGGCGCATCTTATCTATA
GTGGACTATAATGAAGATGGAGAGCTGTCATTGGCTGAGTTCTCTGATTTGATTGCTGCG
TTTGGAAATAAGCTGGCAGCTGAGAAGAAAGAGGAGCTATTCAAACAAGCTGACAGAAAT
GGGGATGGTGTTGTCTGCTTGGATGAGCTAGCCACCCTTCTGGCTATACAGCATGAAAAG
GAACCACTAATCAATTGCTGTCCAGTATGTGGCCAAGTTCTTGAAGTTTCAGATGGGTTG
AACAGCATGATTCATATGACCTTGTGTTTTGATGAGGGGACTGGGAATCAGGTTATGACA
GGAGGTTTCCTGACTGAGAAGGAGGCTTCAAGTGGATGGATGTTCAAACTGAGTGAATGG
GCCCATTTCTCAACTTATGATATCGGTTTAAGGTCTGGTTCAAGTGCATCACATATCTTG
GTTTATGATCGCAGAAAGAAAAGGCTAGTGGAGGAAATAATTGATCGGAAGATTGTCTTG
TCAATGAGGGCTATCTATCAGTCTAAATTTGGCCTTGGCCTTATGGATAATGGCGCAAAA
GAAATCTTGCGGAGCCTCTCTGAAAAACAGGGCAAGAAAATGGATTCTGCTGAATCTGCT
AAAGAAATACCTAACTTCATTGAATTTTTTAAGGGTCAAATAAATATGGATGAAGTCAAG
TATCCACTGGAGCAATTTAAGACATTCAACGAATTTTTCATAAGAGAGTTGAAGCCTGGT
GCAAGACCTATTGCTTTTATAGAACGTGATGATATTGCTGTATGTGCTGCTGATTGCCGT
CTGATGGTATTCAACAGTGTTGCTGATAGTATAAGATTTTGGATCAAGGGTCGAAAGTTT
TCCATCCAAGGTCTTCTGGGGAATGAAGCATGTTCCAGCGCATTTATCAATGGAGCTCTA
GTGATATTTCGCTTGGCACCACAGGTAGAATTGTTGTGA

Peptide Sequence

PEP ID

XP_016435107.1
PEP Infomation

PREDICTED: phosphatidylserine decarboxylase proenzyme 2-like isoform X2 [Nicotiana tabacum]
Sequence

MQNVARKVSKLFVHNLAEMKFKDKWLVCISLGEQTFRTHVSDQTDKPTWNSEKKLLLERH
GAHIARISVFETNRLSKNNLIGYCEIDLLEFLSQDSSSDTEVFDLLDPSSLSTVGRISIS
CCIEDPVDTEKSFVRRILSIVDYNEDGELSLAEFSDLIAAFGNKLAAEKKEELFKQADRN
GDGVVCLDELATLLAIQHEKEPLINCCPVCGQVLEVSDGLNSMIHMTLCFDEGTGNQVMT
GGFLTEKEASSGWMFKLSEWAHFSTYDIGLRSGSSASHILVYDRRKKRLVEEIIDRKIVL
SMRAIYQSKFGLGLMDNGAKEILRSLSEKQGKKMDSAESAKEIPNFIEFFKGQINMDEVK
YPLEQFKTFNEFFIRELKPGARPIAFIERDDIAVCAADCRLMVFNSVADSIRFWIKGRKF
SIQGLLGNEACSSAFINGALVIFRLAPQVELL

Transcript Sequence

Gene sequence data has not been registered.